|
Steps needed to repeat for the analysis of the subset
|
|
6
|
479
|
June 6, 2022
|
|
Alignment in V4 region
|
|
2
|
596
|
June 2, 2022
|
|
Analysis Seqs from different region
|
|
6
|
723
|
May 25, 2022
|
|
How to further classify the OTUs?
|
|
1
|
404
|
May 17, 2022
|
|
Different trainset
|
|
3
|
500
|
May 3, 2022
|
|
What Maxlength and maxhomop should i use?
|
|
2
|
513
|
April 27, 2022
|
|
Processors used by mothur software
|
|
3
|
592
|
April 26, 2022
|
|
ASV analysis and cluser.fragments
|
|
1
|
552
|
January 25, 2022
|
|
Why is performing remove.groups (to remove mock community) necessary before doing Cluster.split? (Mothur MiSeq SOP tutorial)
|
|
2
|
510
|
December 3, 2021
|
|
Test differential representation results in an independent dataset?
|
|
2
|
454
|
December 1, 2021
|
|
Bacteria_unclassified
|
|
10
|
2602
|
November 30, 2021
|
|
Questions about how to "make.contigs" works
|
|
10
|
1307
|
October 4, 2021
|
|
Create database for zoonotic bacteria
|
|
5
|
538
|
August 19, 2021
|
|
Comparing groups with different number of saples
|
|
1
|
526
|
August 2, 2021
|
|
Creating a database
|
|
3
|
658
|
July 23, 2021
|
|
What is the meaning of increasing numbers from classify.seqs?
|
|
5
|
701
|
May 17, 2021
|
|
Can I input this file type:
|
|
1
|
447
|
May 11, 2021
|
|
If phylo.diversity = Faith's PD does it also = Dmean?
|
|
2
|
585
|
March 24, 2021
|
|
Help please with a command o mothur
|
|
7
|
710
|
February 25, 2021
|
|
How does make.contigs merging work?
|
|
8
|
2057
|
February 19, 2021
|
|
Classification of Illumina MiSeq and Sanger sequences into same OTUs
|
|
1
|
499
|
February 18, 2021
|
|
How does pcr.seqs trimming work?
|
|
5
|
1088
|
February 16, 2021
|
|
Collect.single and bstick
|
|
1
|
444
|
January 7, 2021
|
|
All sequences treated as unique with get.groups
|
|
1
|
540
|
September 21, 2020
|
|
HOMOVA results do not agree with what I would expect
|
|
3
|
977
|
June 30, 2020
|
|
Unclassified fungi (Fungal analysis ITS2 region)
|
|
14
|
2329
|
June 19, 2020
|
|
Diffs value for pre.cluster
|
|
1
|
705
|
June 16, 2020
|
|
Mothur vs dada2
|
|
8
|
3774
|
June 2, 2020
|
|
Multiple OTUs for a given Taxonomy
|
|
3
|
804
|
April 8, 2020
|
|
Classification - given names
|
|
7
|
1026
|
April 6, 2020
|