|
ASV analysis and cluser.fragments
|
|
2
|
526
|
February 4, 2022
|
|
Why is performing remove.groups (to remove mock community) necessary before doing Cluster.split? (Mothur MiSeq SOP tutorial)
|
|
3
|
450
|
December 13, 2021
|
|
Test differential representation results in an independent dataset?
|
|
3
|
400
|
December 11, 2021
|
|
Bacteria_unclassified
|
|
10
|
2432
|
November 30, 2021
|
|
Questions about how to "make.contigs" works
|
|
11
|
1157
|
October 14, 2021
|
|
Create database for zoonotic bacteria
|
|
6
|
492
|
August 29, 2021
|
|
Comparing groups with different number of saples
|
|
2
|
490
|
August 12, 2021
|
|
Creating a database
|
|
4
|
568
|
August 2, 2021
|
|
What is the meaning of increasing numbers from classify.seqs?
|
|
6
|
630
|
May 27, 2021
|
|
Can I input this file type:
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|
2
|
408
|
May 21, 2021
|
|
If phylo.diversity = Faith's PD does it also = Dmean?
|
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3
|
541
|
April 3, 2021
|
|
Help please with a command o mothur
|
|
8
|
590
|
March 7, 2021
|
|
How does make.contigs merging work?
|
|
9
|
1889
|
March 1, 2021
|
|
Classification of Illumina MiSeq and Sanger sequences into same OTUs
|
|
2
|
452
|
February 28, 2021
|
|
How does pcr.seqs trimming work?
|
|
6
|
989
|
February 26, 2021
|
|
Collect.single and bstick
|
|
2
|
425
|
January 17, 2021
|
|
All sequences treated as unique with get.groups
|
|
2
|
525
|
October 1, 2020
|
|
HOMOVA results do not agree with what I would expect
|
|
4
|
889
|
July 10, 2020
|
|
Unclassified fungi (Fungal analysis ITS2 region)
|
|
15
|
2147
|
June 29, 2020
|
|
Diffs value for pre.cluster
|
|
2
|
669
|
June 26, 2020
|
|
Mothur vs dada2
|
|
9
|
3449
|
June 12, 2020
|
|
Multiple OTUs for a given Taxonomy
|
|
4
|
709
|
April 18, 2020
|
|
Classification - given names
|
|
8
|
955
|
April 16, 2020
|
|
Suspect to have an overall error rate of 0?
|
|
6
|
750
|
April 14, 2020
|
|
Quality of clustering: Cluster.split versus Cluster commands
|
|
2
|
558
|
April 2, 2020
|
|
"averaging" replicates
|
|
5
|
820
|
March 15, 2020
|
|
alpha diversity after remove low abundance
|
|
10
|
6321
|
March 3, 2020
|
|
How to cite Silva SEED v132
|
|
2
|
2073
|
March 5, 2020
|
|
Training a V4 database from a reference
|
|
6
|
812
|
February 24, 2020
|
|
How can I classify OTUs to "SPECIES" level with mothur?
|
|
9
|
4759
|
December 12, 2019
|