|
Steps needed to repeat for the analysis of the subset
|
|
7
|
314
|
June 16, 2022
|
|
Alignment in V4 region
|
|
3
|
553
|
June 12, 2022
|
|
Analysis Seqs from different region
|
|
7
|
656
|
June 4, 2022
|
|
How to further classify the OTUs?
|
|
2
|
368
|
May 27, 2022
|
|
Different trainset
|
|
4
|
439
|
May 13, 2022
|
|
What Maxlength and maxhomop should i use?
|
|
3
|
468
|
May 7, 2022
|
|
Processors used by mothur software
|
|
4
|
522
|
May 6, 2022
|
|
ASV analysis and cluser.fragments
|
|
2
|
536
|
February 4, 2022
|
|
Why is performing remove.groups (to remove mock community) necessary before doing Cluster.split? (Mothur MiSeq SOP tutorial)
|
|
3
|
469
|
December 13, 2021
|
|
Test differential representation results in an independent dataset?
|
|
3
|
414
|
December 11, 2021
|
|
Bacteria_unclassified
|
|
10
|
2477
|
November 30, 2021
|
|
Questions about how to "make.contigs" works
|
|
11
|
1218
|
October 14, 2021
|
|
Create database for zoonotic bacteria
|
|
6
|
503
|
August 29, 2021
|
|
Comparing groups with different number of saples
|
|
2
|
500
|
August 12, 2021
|
|
Creating a database
|
|
4
|
618
|
August 2, 2021
|
|
What is the meaning of increasing numbers from classify.seqs?
|
|
6
|
651
|
May 27, 2021
|
|
Can I input this file type:
|
|
2
|
427
|
May 21, 2021
|
|
If phylo.diversity = Faith's PD does it also = Dmean?
|
|
3
|
547
|
April 3, 2021
|
|
Help please with a command o mothur
|
|
8
|
650
|
March 7, 2021
|
|
How does make.contigs merging work?
|
|
9
|
1949
|
March 1, 2021
|
|
Classification of Illumina MiSeq and Sanger sequences into same OTUs
|
|
2
|
469
|
February 28, 2021
|
|
How does pcr.seqs trimming work?
|
|
6
|
1014
|
February 26, 2021
|
|
Collect.single and bstick
|
|
2
|
430
|
January 17, 2021
|
|
All sequences treated as unique with get.groups
|
|
2
|
531
|
October 1, 2020
|
|
HOMOVA results do not agree with what I would expect
|
|
4
|
900
|
July 10, 2020
|
|
Unclassified fungi (Fungal analysis ITS2 region)
|
|
15
|
2204
|
June 29, 2020
|
|
Diffs value for pre.cluster
|
|
2
|
681
|
June 26, 2020
|
|
Mothur vs dada2
|
|
9
|
3631
|
June 12, 2020
|
|
Multiple OTUs for a given Taxonomy
|
|
4
|
750
|
April 18, 2020
|
|
Classification - given names
|
|
8
|
966
|
April 16, 2020
|