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Welcome to the mothur forum
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0
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3063
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October 10, 2018
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Using ASV or OTU in 16s analysis
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0
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6
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December 2, 2023
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File mismatch detected after align.seqs or screen.seqs
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0
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7
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December 2, 2023
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Installing mothur error
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6
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38
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December 2, 2023
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Beginner questions: Working step for organism identification
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1
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15
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November 30, 2023
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Errors in cluster.split
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1
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18
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November 30, 2023
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Pre.cluster in unaligned, or cluster split?
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3
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34
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November 30, 2023
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Pre.cluster is very lslow and the fasta file which it produce is blank
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4
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197
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November 30, 2023
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Pcr.seqs does not remove logical amount of sequences with different values of pdiffs/rdiffs
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14
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318
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November 28, 2023
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Count.groups discrepancy?
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3
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48
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December 2, 2023
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Several sequences missing primers and many ambiguous base calls
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7
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48
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November 24, 2023
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Lefse: no class column with more than 2 classes
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1
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27
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November 24, 2023
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The best region for 16S sequencing
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1
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82
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November 2, 2023
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Error with remove.otus
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4
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83
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November 12, 2023
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Issue with venn command
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3
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93
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November 2, 2023
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Phylotypes classification at different taxonomic levels
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1
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83
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October 30, 2023
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Preparing for analysis
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2
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69
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November 9, 2023
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Get.oturep using abundance method
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11
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109
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October 27, 2023
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Using pcr.seqs without a forward primer in the oligo file results in first four bases being removed
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2
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117
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October 23, 2023
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Issue with pre.cluster
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10
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192
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October 30, 2023
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Alignment command
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2
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105
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October 18, 2023
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Overlapping V3-V4 using v2 2x250 bp
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3
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110
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October 18, 2023
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Unique names issue
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2
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87
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October 18, 2023
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Make.contigs is not creating Group file
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2
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88
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October 28, 2023
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Running mothur in hpc with conda
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10
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120
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October 10, 2023
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Generating ASVs that all have a size of one
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12
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141
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October 10, 2023
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Difference between Phylotype and OTUs
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2
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138
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October 12, 2023
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ASV and OTU same number of sequences
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2
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151
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October 12, 2023
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Database contains Oomycete
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1
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133
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September 18, 2023
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V4 region - Archaea and Bacteria at genus level
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3
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117
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September 14, 2023
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