|
About the Commands in mothur category
|
|
1
|
342
|
April 25, 2019
|
|
Metastats (Segmentation fault)
|
|
8
|
54
|
June 15, 2021
|
|
Problem with dist.seqs
|
|
0
|
6
|
June 14, 2021
|
|
Cluster.split for finding Salmonella
|
|
0
|
5
|
June 14, 2021
|
|
Groups explaining grouping on NMDS plot?
|
|
11
|
84
|
June 8, 2021
|
|
Cluster.split leaving temp files behind, but no error message
|
|
2
|
32
|
June 11, 2021
|
|
OTU numbering
|
|
14
|
7498
|
June 1, 2021
|
|
Understanding the rep.fasta file generated through the get.oturep command
|
|
2
|
31
|
June 7, 2021
|
|
Align.seq and filter problems
|
|
6
|
58
|
June 5, 2021
|
|
Cluster.split runtime problem
|
|
6
|
3276
|
November 24, 2015
|
|
filter.seqs : Length of filtered alignment problem
|
|
3
|
2639
|
April 2, 2015
|
|
7040 Segmentation fault - Exited with exit code 139
|
|
5
|
43
|
May 27, 2021
|
|
Normal alignment time and solution for reducing time to run on laptop
|
|
1
|
34
|
May 23, 2021
|
|
What kind of .oligos file should I have for trim.seqs?
|
|
2
|
62
|
May 21, 2021
|
|
chimera.vsearch error
|
|
6
|
651
|
May 6, 2021
|
|
Sanger 16S rRNA gene analysis
|
|
3
|
80
|
May 2, 2021
|
|
Using Mothur to analyze plant rbcl data
|
|
2
|
64
|
April 15, 2021
|
|
How to to trim variable length ITS seqs
|
|
3
|
87
|
April 11, 2021
|
|
All sequences removed with screen.seqs
|
|
6
|
159
|
April 8, 2021
|
|
Issues with setting up pipeline using NCBI SRAs
|
|
4
|
96
|
April 2, 2021
|
|
How to get list of unique OTUs using Venn command ? I am able to get only list of shared OTUs
|
|
2
|
79
|
March 28, 2021
|
|
Make.biom for picrust
|
|
2
|
74
|
March 28, 2021
|
|
Mothur workflow basics and reproducibility
|
|
2
|
88
|
March 25, 2021
|
|
Filter.seqs what kind of numbers should be being removed?
|
|
2
|
66
|
March 14, 2021
|
|
Cluster command is giving me a large number OTUs, more than it should be
|
|
4
|
97
|
March 14, 2021
|
|
Remove.seqs Error: length is not in your count table
|
|
2
|
92
|
March 11, 2021
|
|
Pre.cluster Blanks and segmentation errors
|
|
4
|
89
|
March 7, 2021
|
|
Total Number of OTU
|
|
2
|
100
|
March 5, 2021
|
|
Screen.seqs getting rid of most sequences
|
|
3
|
79
|
March 1, 2021
|
|
Problem with pre.cluster or chimera.vsearch
|
|
5
|
109
|
February 28, 2021
|