|
Count.groups discrepancy?
|
|
3
|
207
|
December 2, 2023
|
|
Several sequences missing primers and many ambiguous base calls
|
|
7
|
278
|
November 24, 2023
|
|
Lefse: no class column with more than 2 classes
|
|
1
|
139
|
November 24, 2023
|
|
The best region for 16S sequencing
|
|
1
|
186
|
November 2, 2023
|
|
Error with remove.otus
|
|
4
|
213
|
November 12, 2023
|
|
Issue with venn command
|
|
3
|
230
|
November 2, 2023
|
|
Phylotypes classification at different taxonomic levels
|
|
1
|
174
|
October 30, 2023
|
|
Preparing for analysis
|
|
2
|
182
|
November 9, 2023
|
|
Get.oturep using abundance method
|
|
11
|
250
|
October 27, 2023
|
|
Using pcr.seqs without a forward primer in the oligo file results in first four bases being removed
|
|
2
|
252
|
October 23, 2023
|
|
Issue with pre.cluster
|
|
10
|
413
|
October 30, 2023
|
|
Alignment command
|
|
2
|
203
|
October 18, 2023
|
|
Overlapping V3-V4 using v2 2x250 bp
|
|
3
|
302
|
October 18, 2023
|
|
Unique names issue
|
|
2
|
194
|
October 18, 2023
|
|
Make.contigs is not creating Group file
|
|
2
|
230
|
October 28, 2023
|
|
Running mothur in hpc with conda
|
|
10
|
254
|
October 10, 2023
|
|
Generating ASVs that all have a size of one
|
|
12
|
307
|
October 10, 2023
|
|
Difference between Phylotype and OTUs
|
|
2
|
266
|
October 12, 2023
|
|
ASV and OTU same number of sequences
|
|
2
|
306
|
October 12, 2023
|
|
Database contains Oomycete
|
|
1
|
229
|
September 18, 2023
|
|
V4 region - Archaea and Bacteria at genus level
|
|
3
|
224
|
September 14, 2023
|
|
Keeping OTUs/ASVs with filter.shared
|
|
2
|
180
|
September 24, 2023
|
|
NextSeq2000 files
|
|
26
|
598
|
September 24, 2023
|
|
Segmentation fault in pcr.seqs
|
|
9
|
229
|
September 23, 2023
|
|
Running Mothur in R: Error Utils class function mothurConvert-int
|
|
2
|
228
|
September 22, 2023
|
|
[ERROR} Your count table contains more than 1 sequence named
|
|
5
|
339
|
September 21, 2023
|
|
AAError: Sequence '215279' was not found in the name or count file, please correct
|
|
2
|
205
|
September 21, 2023
|
|
Mothur can't find temporary files with classify.seqs
|
|
2
|
256
|
September 21, 2023
|
|
Alignment issues
|
|
4
|
301
|
September 5, 2023
|
|
Using a custom taxonomic database
|
|
3
|
220
|
September 5, 2023
|