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Align.seq with silva database and classify.seq using PR2 database
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1
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59
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November 28, 2022
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Classify.seqs error
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1
|
62
|
November 28, 2022
|
|
Get.groups command
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4
|
79
|
December 8, 2022
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Chimera.vsearch output files
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1
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94
|
November 23, 2022
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Count.seqs(compress=f) results in a compressed count_table
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2
|
115
|
November 22, 2022
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|
Triming of E. coli
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3
|
79
|
December 1, 2022
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Making oligos file from our primers?
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2
|
105
|
December 1, 2022
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The same barcodes to different samples?
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4
|
98
|
December 1, 2022
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How to speed up the process using an HPC cluster for OTU allocation
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1
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111
|
November 21, 2022
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Amova analysis
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3
|
1659
|
November 21, 2022
|
|
Homova analysis
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|
1
|
80
|
November 21, 2022
|
|
Add you feature for subsample.seqs command
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2
|
4862
|
November 21, 2022
|
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Query regarding otu file generation
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|
4
|
76
|
November 26, 2022
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SOP for Pacbio amplicon sequences (full length 16S)
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|
1
|
588
|
November 13, 2022
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|
Hypervariable region
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|
2
|
117
|
November 11, 2022
|
|
Count file and fasta file mismatch
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|
3
|
144
|
November 12, 2022
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|
Screen.seqs removed all the sequences
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4
|
158
|
November 12, 2022
|
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Zero-length input fastq sequence in make.contigs
|
|
1
|
70
|
November 1, 2022
|
|
Renaming the sequences in fasta file for asv based analysis
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|
5
|
136
|
October 28, 2022
|
|
Nmds output -nan
|
|
4
|
106
|
October 27, 2022
|
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Gz file runs slower in make.contigs ? (vs. the non-gz version of the same data)
|
|
1
|
78
|
November 6, 2022
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|
Align.seqs and accnos
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|
5
|
137
|
November 5, 2022
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|
[ERROR]: You are missing (
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|
2
|
106
|
November 4, 2022
|
|
Using different reference for each align.seqs and classify.seqs
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|
2
|
98
|
October 31, 2022
|
|
No option for count file in classify.tree
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|
2
|
98
|
October 28, 2022
|
|
Make.file naming
|
|
7
|
145
|
October 24, 2022
|
|
Make.contigs with gz not working
|
|
5
|
149
|
October 24, 2022
|
|
Taxonomy results of mothur do not match with NCBI blast results
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|
5
|
174
|
October 14, 2022
|
|
Classify.seqs(), accnos missing
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|
2
|
231
|
October 21, 2022
|
|
Query regarding assessing error rate in mothur
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|
10
|
114
|
October 19, 2022
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