Align.seq with silva database and classify.seq using PR2 database
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1
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59
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November 28, 2022
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Classify.seqs error
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1
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62
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November 28, 2022
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Get.groups command
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4
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79
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December 8, 2022
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Chimera.vsearch output files
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1
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94
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November 23, 2022
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Count.seqs(compress=f) results in a compressed count_table
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2
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115
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November 22, 2022
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Triming of E. coli
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3
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79
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December 1, 2022
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Making oligos file from our primers?
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2
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105
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December 1, 2022
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The same barcodes to different samples?
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4
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98
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December 1, 2022
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How to speed up the process using an HPC cluster for OTU allocation
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1
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111
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November 21, 2022
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Amova analysis
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3
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1659
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November 21, 2022
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Homova analysis
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1
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80
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November 21, 2022
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Add you feature for subsample.seqs command
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2
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4862
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November 21, 2022
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Query regarding otu file generation
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4
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76
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November 26, 2022
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SOP for Pacbio amplicon sequences (full length 16S)
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1
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588
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November 13, 2022
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Hypervariable region
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2
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117
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November 11, 2022
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Count file and fasta file mismatch
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3
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144
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November 12, 2022
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Screen.seqs removed all the sequences
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4
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158
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November 12, 2022
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Zero-length input fastq sequence in make.contigs
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1
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70
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November 1, 2022
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Renaming the sequences in fasta file for asv based analysis
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5
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136
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October 28, 2022
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Nmds output -nan
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4
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106
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October 27, 2022
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Gz file runs slower in make.contigs ? (vs. the non-gz version of the same data)
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1
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78
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November 6, 2022
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Align.seqs and accnos
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5
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137
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November 5, 2022
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[ERROR]: You are missing (
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2
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106
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November 4, 2022
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Using different reference for each align.seqs and classify.seqs
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2
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98
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October 31, 2022
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No option for count file in classify.tree
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2
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98
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October 28, 2022
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Make.file naming
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7
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145
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October 24, 2022
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Make.contigs with gz not working
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5
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149
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October 24, 2022
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Taxonomy results of mothur do not match with NCBI blast results
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5
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174
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October 14, 2022
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Classify.seqs(), accnos missing
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2
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231
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October 21, 2022
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Query regarding assessing error rate in mothur
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10
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114
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October 19, 2022
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