I am getting the following error when trying to run chimera.vsearch; is there an issue with the output file from the previous command (pre.cluster)? I tried to rerun pre.cluster, but I got the same result.
[ERROR]: HMeuks.trim.contigs.good.unique.good.filter.unique.precluster.count_table is blank. Please correct.
vsearch v2.11.1_macos_x86_64, 16.0GB RAM, 8 cores
Unable to read from file (HMeuks.trim.contigs.good.unique.good.filter.unique.precluster.temp)
It took 0 secs to check your sequences. 0 chimeras were found.