shared analysis

mothur bugs
1

I keep getting a segmentation fault from cluster.shared(). Am I doing this right?

[b]mothur > read.otu(list=all_untreated_women.alignment.fn.list,group=untreated_women.groups,groups=W1-W2-W3-W4-W5-W6-W7-W8-W9-W10-W11-W12-W13-W14-W15-W16,label=0.03)

0.03

mothur > read.otu(shared=all_untreated_women.alignment.fn.shared)


mothur > collect.shared(label=0.03)

Segmentation fault
Laocoon:untreated women analysis jamesafoster$[/b]

2

Thanks for bringing this issue to our attention! I have fixed the problem and uploaded version 1.7.2 to the wiki.

3

Can you please update the wiki or forum with running version numbers when changes like this are made? Would be a great help to keep up with changes and making sure I’m using the latest version.

Thanks,
Chris