I’m having problems with the get.seqs command (in both v1.8 and v1.9 for windows). When I enter a get.seqs command such as:
get.seqs(fasta=bigdataset.fasta, accnos=smallerdataset.accnos)
I get an error message stating that I should only enter a .fasta or .accnos (but, presumably not both). When I follow this advice and enter just the .fasta, I get a message telling me that I need the .accnos. (I should note that I’m using this command after having set my input and output directories.)
When I use v1.6, everything seems to work fine and I get my .pick file without any problems.