LefSe on 1.46 version does not report the “Class” column in its lefse_summary output, unlike the older version 1.42.
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| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| LefSe error v 1.46.1 missing class | 1 | 440 | January 27, 2022 | |
| Lefse: no class column with more than 2 classes | 0 | 205 | November 14, 2023 | |
| Class is missing from the lefse output | 4 | 88 | October 23, 2025 | |
| LEfSe Class Column missing if the comparison is not pairwise with mothur 1.48.0 | 0 | 156 | February 8, 2024 | |
| Lefse no class column with more than 2 classes | 2 | 287 | June 19, 2023 |