Getting an error after running unique.seqs command

Commands in mothur
1

11000 6041
12000 6504
[ERROR]: You already have a sequence named C9410SVQ.01_12339209 in your fasta file, sequence names must be unique, please correct.
[ERROR]: You already have a sequence named F940TY37.05_20283888 in your fasta file, sequence names must be unique, please correct.
13000 6990

I don’t know how to fix this - no idea when the duplicate name was created, do you have ideas?

2

Hi,

Can you post the upstream commands you are running prior to this command? Also, what version and operating system are you using?

Pat

3

Thank you for your reply Pat!

I have been working with Windows and the mother version is 1.42.3

mothur > make.file(inputdir=J:\mothur_1, type=fastq, prefix=stability)

4

Can you post your stability file?

5

This topic was automatically closed 10 days after the last reply. New replies are no longer allowed.