Hi, can somebody help me with this. After running align.seqs with silva.bacteria, I tried running the command summary.seqs following the MiSeq SOP and keep getting an error. How do I fix this?
mothur > summary.seqs(fasta=stability.paired.trim.contigs.good.unique.align, count=stability.paired.trim.contigs.good.count_table)
Using 4 processors.
[ERROR]: Your count file contains 1320347 unique sequences, but your fasta file contains 435712. File mismatch detected, quitting command.