rarefaction.single(freq=100, iters=10000, processors=4)
I get all the .rarefaction files but then:
[ERROR]: Could not open .../final.pick.merged.an.0.03.subsample.AD1d_H_bac.rarefaction_AD1d_H [ERROR]: has occurred in the RareFactCommand class function createGroupFile. Please contact Pat Schloss at firstname.lastname@example.org, and be sure to include the mothur.logFile with your inquiry.
AD1d_H_bac is my sample name and there’s a file called final.pick.merged.an.0.03.subsample.AD1d_H_bac.rarefaction which seems fine
but there isn’t any