Hi,
I used the silva fasta file as template and silva.rdp.taxonomy as taxonomy file but got the following error. When using silva.slv.taxonomy, there is no error. Does anyone has similar situation?
Thanks,
Chien-Chi
mothur > classify.seqs(fasta=MID.final.fn.0.10.rep.fasta, template=./SilvaTaxonomyFiles/silva.bacteria.fasta, taxonomy=./SilvaTaxonomyFiles/silva.rdp.taxonomy)
Reading in the ../SilvaTaxonomyFiles/silva.rdp.taxonomy taxonomy... DONE.
Generating search database... DONE.
It took 8 seconds generate search database.
Reading template probabilities... DONE.
It took 11 seconds get probabilities.
Classifying sequences from MID.final.fn.0.10.rep.fasta ...
*** glibc detected *** mothur: free(): invalid next size (fast): 0x000000000ed7c5e0 ***
======= Backtrace: =========
/lib64/libc.so.6[0x3808c71cec]
/lib64/libc.so.6(cfree+0x8c)[0x3808c7590c]
mothur[0x408980]
mothur[0x70cded]
mothur[0x72a345]
mothur[0x72afbd]
mothur[0x717d30]
mothur[0x71855d]
mothur[0x71bc2a]
mothur[0x5ee2f4]
mothur[0x60faea]
/lib64/libc.so.6(__libc_start_main+0xf4)[0x3808c1d974]
mothur(__gxx_personality_v0+0x171)[0x403e69]
======= Memory map: ========
00400000-00840000 r-xp 00000000 fd:00 162267142 /home/chienchi/bin/mothur
00a40000-00a41000 rw-p 00440000 fd:00 162267142 /home/chienchi/bin/mothur
00a41000-00a42000 rw-p 00a41000 00:00 0
0e552000-27404000 rw-p 0e552000 00:00 0 [heap]
3808800000-380881c000 r-xp 00000000 fd:00 133234899 /lib64/ld-2.5.so
3808a1b000-3808a1c000 r--p 0001b000 fd:00 133234899 /lib64/ld-2.5.so
3808a1c000-3808a1d000 rw-p 0001c000 fd:00 133234899 /lib64/ld-2.5.so
3808c00000-3808d4c000 r-xp 00000000 fd:00 133234912 /lib64/libc-2.5.so
3808d4c000-3808f4c000 ---p 0014c000 fd:00 133234912 /lib64/libc-2.5.so
3808f4c000-3808f50000 r--p 0014c000 fd:00 133234912 /lib64/libc-2.5.so
3808f50000-3808f51000 rw-p 00150000 fd:00 133234912 /lib64/libc-2.5.so
3808f51000-3808f56000 rw-p 3808f51000 00:00 0
3809000000-3809082000 r-xp 00000000 fd:00 133234929 /lib64/libm-2.5.so
3809082000-3809281000 ---p 00082000 fd:00 133234929 /lib64/libm-2.5.so
3809281000-3809282000 r--p 00081000 fd:00 133234929 /lib64/libm-2.5.so
3809282000-3809283000 rw-p 00082000 fd:00 133234929 /lib64/libm-2.5.so
3809400000-3809402000 r-xp 00000000 fd:00 133234934 /lib64/libdl-2.5.so
3809402000-3809602000 ---p 00002000 fd:00 133234934 /lib64/libdl-2.5.so
3809602000-3809603000 r--p 00002000 fd:00 133234934 /lib64/libdl-2.5.so
3809603000-3809604000 rw-p 00003000 fd:00 133234934 /lib64/libdl-2.5.so
380a400000-380a435000 r-xp 00000000 fd:00 24399879 /usr/lib64/libreadline.so.5.1
380a435000-380a634000 ---p 00035000 fd:00 24399879 /usr/lib64/libreadline.so.5.1
380a634000-380a63c000 rw-p 00034000 fd:00 24399879 /usr/lib64/libreadline.so.5.1
380a63c000-380a63d000 rw-p 380a63c000 00:00 0
3816200000-381620d000 r-xp 00000000 fd:00 133234897 /lib64/libgcc_s-4.1.2-20080825.so.1
381620d000-381640d000 ---p 0000d000 fd:00 133234897 /lib64/libgcc_s-4.1.2-20080825.so.1
381640d000-381640e000 rw-p 0000d000 fd:00 133234897 /lib64/libgcc_s-4.1.2-20080825.so.1
381b600000-381b6e6000 r-xp 00000000 fd:00 24385133 /usr/lib64/libstdc++.so.6.0.8
381b6e6000-381b8e5000 ---p 000e6000 fd:00 24385133 /usr/lib64/libstdc++.so.6.0.8
381b8e5000-381b8eb000 r--p 000e5000 fd:00 24385133 /usr/lib64/libstdc++.so.6.0.8
381b8eb000-381b8ee000 rw-p 000eb000 fd:00 24385133 /usr/lib64/libstdc++.so.6.0.8
381b8ee000-381b900000 rw-p 381b8ee000 00:00 0
381ba00000-381ba4e000 r-xp 00000000 fd:00 24387361 /usr/lib64/libncurses.so.5.5
381ba4e000-381bc4e000 ---p 0004e000 fd:00 24387361 /usr/lib64/libncurses.so.5.5
381bc4e000-381bc5c000 rw-p 0004e000 fd:00 24387361 /usr/lib64/libncurses.so.5.5
381bc5c000-381bc5d000 rw-p 381bc5c000 00:00 0
2b6c7ac29000-2b6c7ac2a000 rw-p 2b6c7ac29000 00:00 0
2b6c7ac2b000-2b6c7ac2c000 rw-p 2b6c7ac2b000 00:00 0
2b6c7ac45000-2b6c7ac49000 rw-p 2b6c7ac45000 00:00 0
2b6c7ac49000-2b6c7e218000 r--p 00000000 fd:00 24385614 /usr/lib/locale/locale-archive
2b6c7e218000-2b6c7e21f000 r--s 00000000 fd:00 24477954 /usr/lib64/gconv/gconv-modules.cache
2b6c7e254000-2b6c7e5bf000 rw-p 2b6c7e254000 00:00 0
2b6c80000000-2b6c80021000 rw-p 2b6c80000000 00:00 0
2b6c80021000-2b6c84000000 ---p 2b6c80021000 00:00 0
7fff29b81000-7fff29b96000 rw-p 7ffffffea000 00:00 0 [stack]
ffffffffff600000-ffffffffffe00000 ---p 00000000 00:00 0 [vdso]