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Many observed OTU
|
|
2
|
138
|
March 7, 2024
|
|
Issue with creating biom file (make.biom) for use in FAPROTAX protocol
|
|
1
|
230
|
March 7, 2024
|
|
LEfSe problem 'convert ASV to an integer'
|
|
1
|
156
|
March 7, 2024
|
|
Different start and end position after chimera
|
|
1
|
196
|
March 7, 2024
|
|
Remove.lineage gets stuck on alignreport file
|
|
3
|
124
|
March 7, 2024
|
|
Align sequence with no primers
|
|
3
|
163
|
March 7, 2024
|
|
Problem with groups for single end reads
|
|
1
|
143
|
March 5, 2024
|
|
Nanopore Fastq not recognized by Mothur
|
|
4
|
436
|
February 27, 2024
|
|
Dist.shared vs summary.shared commands for beta diversity
|
|
5
|
218
|
February 26, 2024
|
|
Pre.cluster is very lslow and the fasta file which it produce is blank
|
|
6
|
605
|
February 20, 2024
|
|
Stability.contigs.count_table
|
|
4
|
183
|
February 20, 2024
|
|
Demultiplex dual indexed Illumina files
|
|
6
|
450
|
February 12, 2024
|
|
Stuck at cluster.split
|
|
1
|
166
|
February 9, 2024
|
|
LEfSe Class Column missing if the comparison is not pairwise with mothur 1.48.0
|
|
0
|
155
|
February 8, 2024
|
|
Design file will not open
|
|
1
|
170
|
January 30, 2024
|
|
working with single end reads
|
|
8
|
3849
|
January 24, 2024
|
|
How to work with just forward reads?
|
|
7
|
1842
|
January 24, 2024
|
|
LefSe error: about the ram
|
|
0
|
147
|
January 22, 2024
|
|
No summary output after lefse
|
|
2
|
185
|
January 19, 2024
|
|
Dist file from split.cluster
|
|
1
|
149
|
January 18, 2024
|
|
Errors following align.seqs
|
|
7
|
755
|
January 16, 2024
|
|
Hi, I'm working 16s rRNA analysis. Recently I got my Illumina sequences for my sample. I have my sequence with 001_R1 AND 001_R2 with 155 dual sample sequence. Do I need to rename the fastq files or I should make some oligo for making stability files
|
|
5
|
235
|
January 12, 2024
|
|
Stuck at clustering, its running for more than a week
|
|
6
|
432
|
January 10, 2024
|
|
Filter.seqs error: Sequences are not all the same length
|
|
2
|
301
|
January 9, 2024
|
|
Assessing differences in communities sequenced at two diff. sequencing facilities (same primers)
|
|
2
|
239
|
January 4, 2024
|
|
Pcr.seqs removing many sequences
|
|
1
|
291
|
January 4, 2024
|
|
Errors in cluster.split
|
|
10
|
439
|
December 18, 2023
|
|
LDA score(log 10)
|
|
0
|
215
|
December 18, 2023
|
|
filter.seqs gives the error: Sequences are not all the same length, please correct.
|
|
13
|
4268
|
December 14, 2023
|
|
Degap.seqs with OTU abundance sorting
|
|
1
|
201
|
December 7, 2023
|