I do not understand the output of the unifrac.unweighted command (1.39.5). I ran:
…and got these four files as the output:
So when I look into the files, *uwsummary and *column.dist contain the same values, whereas *ave.dist file is different.
I assume *ave.dist is an average calculated from all the iterations, but where does than the *uwsummary comes from?
Here are the first 2 lines:
BA1b BA1a 0.665693
BA4 BA1a 0.638282
BA1b BA1a 0.681662
BA4 BA1a 0.640782
Thanks in advance for your help,