I not find the template= silva.nogap.fasta What is required to make classify.seqs (previous step) that that will generate the silva.full.taxonomy file, and this file is essential to complete classify.otus. Already tried to use the silva.bacteria.fasta as template but didn’t work. Does anyone has an idea how file I can use or Where I can download silva.nogap.fasta file?
Thanks in Advance
silva.bacteria.fasta should work. what error message do you get?