Hi!
I am running the 16S workflow and while running the pcr.seqs command I am getting segmentation fault (core dumped) error. I tried running it on just one processor, 8 processors and all processors but getting the same error.
Some details:
fasta = silva.nr_v138_1.align downloaded from the Mothur website
oligos = pcr.oligos
Contents of pcr.oligos file:
forward CCTAYGGGRBGCASCAG
reverse ATTAGATACCCNNGTAGTCC
Error:
mothur > pcr.seqs(fasta=silva.nr_v138_1.align, oligos=pcr.oligos, keepdots=F
, processors=1)
Using 1 processors.
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146601
Segmentation fault (core dumped)
I would greatly appreciate any guidance or solutions you guys provide. Thanks for you time!