I am not able to put this together.
I have two groups of seqs. I got a rank abund for each group using the read.otu of .list from read.dist.
I also have the .shared file.
I got the rep fasta seqs belonging to each label by-
How do I get a rep fasta sequence belonging to each rank in a particular group. Or should I just run the analysis as single sample?
I feel like I have the info, but I am not able to put it together. Thanks for helping.