I’m learning Mothur by going through example analysis(Costello stool analysis). Now I have problems in the step of dist.seqs:
I put “output=1t”, but Mothur said"It is not a valid output form"; then I got output file of “stool. final .dist” instead of " stool.final.phylip.dist", I was not able to continue the next command of “clearcut”
I have tried several times following the instructions, but always the same problem, could anyone help me what i did wrong in these steps?
Another Q, does anybody know when the web-based Mothur version will be released?
Thank you very much!!