classify.seqs - downloading gg_99.pds.ng.fasta file

Commands in mothur
1

Hello,

Im quite new here, a bit greenhorn on the bioinformatics. Im facing the troubles with the finding the files gg_99.pds.ng.fasta and gg_99.pds.tax for use with the command classify.seqs(fasta=[NameFile].trim.unique.filter.unique.precluster.pick.fasta, name=[NameFile].trim.unique.filter.unique.precluster.pick.names, template=gg_99.pds.ng.fasta, taxonomy=gg_99.pds.tax, cutoff=80, probs=F, processors=3).

Can anyone help me where to find them?

Thank you in advance.

Martina

2

The mothur-compatible Greengenes files are available here.

Hope that helps.