I am trying to align my .good.unique.fasta to my silva reference file (24850702 seq, 598760 unique seq). I basicly have done copy and paste from previous successfull analysis, but this time it won’t work. The analysis is running and I get the output on the screen:
" It took 9221 secs to align 598760 sequences.
Output File Names:
However, the files contain nothing and no mothur logfile is created. Could this be caused by the large number of sequences? Other options I could try?? :?: