align.check does not take name file


I just tried align.check for the first time. If I give it the name option it complains it does not take that option (“The valid parameters are: fasta, map, inputdir, and outputdir.”). If I omit the name file it warns that I didn’t give it a name file but there is a valid one. This is in the current mothur version 1.27.0.



Thanks for reporting this bug. It will be fixed in our next release.