Dear members of the MOTHUR community, I would like to know if you could support me because I have problems with the command using the new version of Mothur 1.47.0
mothur > chimera.vsearch(fasta=stability.trim.contigs.good.unique.good.filter.unique.precluster.fasta, count=stability.trim.contigs.good.unique.good.filter.unique.precluster.count_table, dereplicate=t) it does not generate the files
Output File Names:
stability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.pick.count_table
stability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.chimeras
stability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.accnos
It only generates these files for me:
*tability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.chimeras
stability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.accnos
So not having the file
stability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.pick.count_table
I can’t generate the file using the command and it throws me an error make.shared(list=stability.trim.contigs.good.unique.good.filter.unique.precluster.pick.pick.opti_mcc.list, count=stability.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.pick.pick.count_table, label=0.03)
[ERROR]: Your count table does not have group info. Please correct.
Could you tell me what I can do in this case, thank you very much for your attention and support