mothur

Microbial abundance/diversity


#1

Hi All,
Can anybody please direct me how I may get the relative abundance for my data sets? I am interested in generating abundance data at both the phyla and the order level. I have generated and classified my OTUs, but can’t seem to find my way from there.
Thanks a lot!


#2

You can use get.relabund from the shared file


#3

Thank you very much, Prof. Schloss.


#4

This topic was automatically closed 10 days after the last reply. New replies are no longer allowed.