Specific problem : It shows that I spliced 354959 sequences in total, but the summary.seqs of fasta file shows 570747 sequences. I do not know why this situation occues
Group count:
Group_0 46079
Group_1 40237
Group_2 44860
Group_3 72493
Group_4 48151
Group_5 103139
Total of all groups is 354959
It took 27 secs to process 354959 sequences.
Output File Names:
stability.trim.contigs.fasta
stability.scrap.contigs.fasta
stability.contigs_report
stability.contigs.count_table
mothur > summary.seqs(fasta=stability.trim.contigs.fasta)
Using 64 processors.
Start End NBases Ambigs Polymer NumSeqs
Minimum: 1 0 0 0 1 1
2.5%-tile: 1 345 345 0 4 14269
25%-tile: 1 406 406 0 4 142687
Median: 1 408 408 0 5 285374
75%-tile: 1 409 409 0 5 428061
97.5%-tile: 1 427 427 4 6 556479
Maximum: 1 890 888 67 211 570747
Mean: 1 406 405 0 4
# of Seqs: 570747
It took 2 secs to summarize 570747 sequences.
Output File Names:
stability.trim.contigs.summary