mothur

Fungal sequence processing SOP


#1

Dear all,

I’m completely new to processing fungal sequence data in Mothur (but familiar with bacterial sequence analysis). Could anyone suggest a SOP for fungal microbiome analysis (or refer to relevant reading material)?

Many thanks,

M


#2

not really an sop, but here’s my batch file. https://github.com/krmaas/bioinformatics/blob/master/mothur.fungal.batch


#3

Thank you. Will go through it.


closed #4

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