error--flip=t parameter at Linux version


I am using Mothur version 1.39.5 Linux version (, 43MB). Pipeline is not able to run flip=t parameter at align.seqs command. It shows following error…But, window version is allow to take that parameter and run.

error::::::Segmentation fault (core dumped)


Hmm… Could you send your input files and log file to


Hi, I sent the files.