cluster.seqs

Commands in mothur
1

Hi,
I have around 3000 sequences and when I am trying to cluster it using cluster.seqs() command, I am only getting this:
unique 1 2
0.03 2 0 1

Please can anyone explain whats going on.


Thanks!!!
2

Is this the entire line? Could you post the cluster command you are running? Mothur outputs the sabund information to the screen. Here’s a link explaining what it means, http://www.wiki.mothur.org/wiki/Sabund_file.