using the latest trainingset by RDP, in which some renaming has been done:
To avoid confusion, the phylum Cyanobacteria has been renamed Cyanobacteria/Chloroplast. In this phylum, the Chloroplasts have been moved to an new artificial Chloroplast Chloroplast.
Now, when I want to remove taxon=Chloroplast, everything in the phylum is removed, including the Cyanobacteria I want to keep. I could remove the chloroplasts by typing the exact names, e.g. taxon=Streptophyta-Chlorophyta, but, looking at the rankId, there appear to be some unclassified chloroplast lineage(s), which can’t be removed without removing all unclassified sequences (taxon=unclassified).
Could not an extra parameter ‘rankID’ be included to handle everything at once?