mothur

Permanova for Beta diversity

#1

Please, can anyone help with PERMANOVA using mothur

#2

In mothur the command is called amova and it’s shown in the MiSeq SOP wiki page. What are you struggling to do?

#3

Hello Schloss,

Thanks for a prompt response. I wanted to use PERMANOVA to account for differences in the beta diversity of the metagenomic dataset.

Sincerely,

Bukola