Method(s) of timing mothur functions?


I am currently involved in a project that is utilizing mothur, and am trying to implement timing on the mothur functions that are being invoked, but I’m encountering trouble due to my lack of experience with mothur. Is there a method of implementing timing of mothur functions that I just don’t know about?

Thank you for your time,


if you run mothur from the command line you could do something like this…

time mothur batchfile

The batch file would contain a list of all of your commands.