Alignment command

1

Dear all,
Is there any difference between the files Silva.align and Silva.bacteria.fasta to be used in the ‘reference’??
In positive case, the start and end position will be different, right? Where can I get the latter? Sorry but I didn’t find it in the Silva website …

Thanks in advance,

2

They’ll be the same coordinates. Those are two different versions of the database.

Pat

3

Hi Pat,
thank you for your reply