Summary.seqs error after make.contigs

Hi all,

I am getting the following error message when I try to execute summary.seqs on the Galaxy database (below). I would greatly appreciate any suggestions on how I can fix this. Thanks!


mothur > summary.seqs(fasta=fasta.dat,processors=6)
[ERROR]: fasta.dat is blank, aborting.
You have no current fastafile and the fasta parameter is required.

Using 6 processors.
[ERROR]: did not complete summary.seqs.

mothur > quit

Detected 2 [ERROR] messages, please review.

Sorry, but we have nothing to do with the galaxy implementation of mothur. I know that they’re often a few versions behind the current version of mothur.

That error message means that there’s either nothing in the file or the file doesn’t exist.

This topic was automatically closed 10 days after the last reply. New replies are no longer allowed.