mothur

Silva 138-GTDB new taxonomy for Lactobacilli

Commands in mothur
#1

Hi,

I used Silva 138 for my mothur analysis. The final taxonomic results did not include the new taxonomy for Lactobacilli and I would like to ask if I have to do a few more steps to get the new taxonomy results.

Thank you

#2

Hi Chrissa,

It’s been a while since I generated the v138 files. Can you tell me more about what’s missing or what you’re expecting to see in the data?

Thanks,
Pat

#3

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