# Remove.rare taking too long to run

**URL:** <https://forum.mothur.org/t/remove-rare-taking-too-long-to-run/20371>\
**Category:** Uncategorized\
**Created:** [March 3, 2020, 9:42am UTC](https://forum.mothur.org/t/remove-rare-taking-too-long-to-run/20371 "2020-03-03T09:42:49Z")\
**Posts on this page:** 4\
**Page:** 1

<div class="post-metadata">

**Author:** ![Vinaytn56](https://avatars.discourse-cdn.com/v4/letter/v/3bc359/32.png) [@Vinaytn56](https://forum.mothur.org/u/Vinaytn56)\
**Post date:** [March 3, 2020, 9:42am UTC](https://forum.mothur.org/t/remove-rare-taking-too-long-to-run/20371/1 "2020-03-03T09:42:49Z")

</div>

Remove.rare command is running from more than 24 hours without any changes. can you please help

---

<div class="post-metadata">

**Author:** ![westcott](https://yyz2.discourse-cdn.com/flex036/user_avatar/forum.mothur.org/westcott/32/18_2.png) [@westcott](https://forum.mothur.org/u/westcott)\
**Post date:** [March 4, 2020, 5:39pm UTC](https://forum.mothur.org/t/remove-rare-taking-too-long-to-run/20371/2 "2020-03-04T17:39:07Z")

</div>

What version of mothur are you running? Could you post the command you ran?

---

<div class="post-metadata">

**Author:** ![Vinaytn56](https://avatars.discourse-cdn.com/v4/letter/v/3bc359/32.png) [@Vinaytn56](https://forum.mothur.org/u/Vinaytn56)\
**Post date:** [March 5, 2020, 4:46am UTC](https://forum.mothur.org/t/remove-rare-taking-too-long-to-run/20371/3 "2020-03-05T04:46:23Z")

</div>

I am running web version of Mothur V.1.42.0. The command is remove.rare(list=current,count=current,nseqs=1,label=0.03). Its been running from 2.3.20 (4 days).

Note: Analysing 8 sequences with 8 processors system.

---

<div class="post-metadata">

**Author:** ![westcott](https://yyz2.discourse-cdn.com/flex036/user_avatar/forum.mothur.org/westcott/32/18_2.png) [@westcott](https://forum.mothur.org/u/westcott)\
**Post date:** [March 5, 2020, 7:18pm UTC](https://forum.mothur.org/t/remove-rare-taking-too-long-to-run/20371/4 "2020-03-05T19:18:34Z")

</div>

Are you seeing this issue in our current version, 1.43.0 [https://github.com/mothur/mothur/releases/tag/v.1.43.0](https://github.com/mothur/mothur/releases/tag/v.1.43.0)? If so, can you send your list and count files to [mothur.bugs@gmail.com](mailto:mothur.bugs@gmail.com)?
