Mothur data grouping

Hello,

I am doing ITS2 analysis in mothur. I am now running all my data in one analysis but will eventually have to divide this into several groups. How do I do that?

Thank you very much!

You will have to run cluster or cluster.split and then make.shared to get the counts for each OTU in each sample.

Hi Pat,

Thank you very much. Will try that!

Best,
Kus