mothur

Get fasta output

hi

I have a fastq file and run screen.seqs to reduce the number of counts from the counts table.

is there any way to output the now smaller fasta/fastq file?

Hi staj,

If you’re running a fasta and count_table file through screen.seqs, the output will be a file ending in good.fasta and good.count_table. If this doesn’t help, can you provide more information on the actual steps you are running?

Pat

Thank you for this Professor Schloss.