# Bug on v.1.42.1 Linux

**URL:** https://forum.mothur.org/t/bug-on-v-1-42-1-linux/19967
**Category:** mothur bugs
**Created:** [June 17, 2019, 10:37am UTC](https://forum.mothur.org/t/bug-on-v-1-42-1-linux/19967 "2019-06-17T10:37:33Z")
**Posts on this page:** 4
**Page:** 1

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### Author: ![marclliros](https://avatars.discourse-cdn.com/v4/letter/m/82dd89/32.png) [@marclliros](https://forum.mothur.org/u/marclliros)
#### Post date: [June 17, 2019, 10:37am UTC](https://forum.mothur.org/t/bug-on-v-1-42-1-linux/19967/1 "2019-06-17T10:37:33Z")

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Hello mothur community

I am running mothur in a linux computer analysing 18S Illumina amplicons.  
After running …  
summary.tax(taxonomy=0mm18SLinux.trim.contigs.good.unique.good.filter.unique.precluster.pick.pds.wang.pick.taxonomy,count=0mm18SLinux.trim.contigs.good.unique.good.filter.unique.precluster.denovo.vsearch.pick.pick.count\_table)

…

I obtanied the following error:

[ERROR]: M05074\_136\_000000000-C9Y5V\_1\_2102\_6834\_22572 is not in your count table. Please correct.  
[ERROR]: M05074\_136\_000000000-C9Y5V\_1\_2102\_6834\_22572 is not in your count table. Please correct.  
The sequence is either in count\_table and taxonomy files.  
I realized that in taxonomy file, sequence is the first listed whereas in count\_table is not (in fact 12th).  
Could it be the problem?? Any idea on how to solve it?

Thanks for help and comprehension

Marc

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### Author: ![westcott](https://yyz2.discourse-cdn.com/flex036/user_avatar/forum.mothur.org/westcott/32/18_2.png) [@westcott](https://forum.mothur.org/u/westcott)
#### Post date: [June 24, 2019, 7:06pm UTC](https://forum.mothur.org/t/bug-on-v-1-42-1-linux/19967/2 "2019-06-24T19:06:02Z")

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We had a bug in the count table remove functions that is causing this issue. It has been fixed in version 1.42.3. Can you give it a try, [https://github.com/mothur/mothur/releases/tag/v.1.42.3](https://github.com/mothur/mothur/releases/tag/v.1.42.3)?

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### Author: ![marclliros](https://avatars.discourse-cdn.com/v4/letter/m/82dd89/32.png) [@marclliros](https://forum.mothur.org/u/marclliros)
#### Post date: [June 25, 2019, 7:33am UTC](https://forum.mothur.org/t/bug-on-v-1-42-1-linux/19967/3 "2019-06-25T07:33:46Z")

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Thanks Sarah @westcott … running it … keep you posted  
Again thanks a lot  
Marc

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### Author: ![system](https://yyz2.discourse-cdn.com/flex036/user_avatar/forum.mothur.org/system/32/2_2.png) [@system](https://forum.mothur.org/u/system)
#### Post date: [July 5, 2019, 7:36am UTC](https://forum.mothur.org/t/bug-on-v-1-42-1-linux/19967/4 "2019-07-05T07:36:17Z")

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