mothur

Topic Replies Activity
get.oturep to get representative sequences for each OTU 3 March 29, 2016
Sequence Length 12 May 30, 2019
Corr.axes metadata - catagorical data and missing values 3 June 9, 2019
make.shared error 7 May 28, 2019
More contigs than reads 2 May 28, 2019
Code to check for duplicated sequences? 3 May 23, 2019
Pick.pick output file 8 June 2, 2019
Summary.seqs file mismatch detected 2 May 23, 2019
Assessing error rate with a mock community - 10 species (including fungi) in log distribution 3 June 2, 2019
Make.contigs problem in mothur v.1.42.0 windows 7 May 21, 2019
Copying folder to mothur directory in ubuntu 3 May 21, 2019
Mothur file to biom 4 May 27, 2019
make.contigs 4 May 17, 2019
How to get quality scores of the reads in Miseq pipeline 2 May 16, 2019
Make.sra "error": "sample A is a duplicate sample to B 6 May 25, 2019
Mothur executable in Windows 3 May 15, 2019
[ERROR]: is not in your groupfile, please correct when using count.seqs 4 May 14, 2019
Mothur Update Problem 3 May 14, 2019
Dist.shared with subsampling hangs in 1.41.3 8 May 23, 2019
Problem for demultiplexing Miseq Paired end reads using make.contigs with oligos file 4 May 20, 2019
Duplicate data runs with non-duplicated results 7 May 10, 2019
Which label or taxlevel means genus level in mothur? 3 May 20, 2019
Which commands require prior use of the "sub.sample" command? 4 May 20, 2019
Vsearch in 1.42 10 May 20, 2019
Error in nmds plots with unifrac files 3 May 7, 2019
Trim.seqs works in 1.39.5 fails in higher versions 3 May 17, 2019
Chimera.vsearch v2.11.1 2 May 7, 2019
Two output files from summary.single 3 May 16, 2019
Make.lefse - [ERROR]: can't find Otu689 in constaxonomy file. Do the distances match, did you forget to use the label parameter? 6 May 11, 2019
"[ERROR]: * is not in your file, please correct." when the seqname can be found from the files and summary.seqs works okay 2 April 30, 2019