mothur

Theory behind mothur


About the Theory behind mothur category (1)
Input data and biom file generation clarity (1)
MinION 16S data analysis (1)
Combining sequence datasets (6)
Is trimming needed? (3)
Contigs larger than expected (2)
Subsampling 3 different groups at same level (6)
Ion Torrent guidelines ? (10)
OTUs vs ASVs (3)
Lots of unique seqs and too few chimeras? (3)
sequencing error and make.contigs (2)
Information on classify.seqs cutoff (2)
Some question about pad sequence (2)
Using Comparative RNA Web (CRW) site alignment as a reference (1)
Tree for Unifrac.Weighted? (6)
Aligned SILVA vs unaligned RDP (2)
difference between total seq numbers (3)
How to make reference database of nifH genes to use as reference in Mothur (12)
Mothur removing group after screen.seqs command? (5)
515f 806r v4 primers (4)
ParsScore (2)
No sequence reads mapping to Enterobacteriaceae (3)
Challenges faced during ITS analysis with UNITE (14)
ITS SOP and ITS databases (5)
Pooling sequence data (2)
Alpha diversity - rarefaction curves and Chao1 (4)
Formatting Silva v128 reference taxonomy (3)
pcr.seqs start/stop for V3_V4 on MiSeq (8)
Need set up assistance from Mac users (3)
How it is possible to perform multivariate analysis when the number of variables (=taxa) are much higher than samples? (3)