|
About the Theory behind mothur category
|
|
0
|
511
|
October 28, 2009
|
|
18S best region
|
|
1
|
58
|
March 30, 2024
|
|
Different start and end position after chimera
|
|
2
|
101
|
March 17, 2024
|
|
Align sequence with no primers
|
|
4
|
78
|
March 17, 2024
|
|
Several sequences missing primers and many ambiguous base calls
|
|
7
|
268
|
November 24, 2023
|
|
ASV and OTU same number of sequences
|
|
2
|
295
|
October 12, 2023
|
|
What is the minimum required overlap to form a contig?
|
|
4
|
200
|
September 7, 2023
|
|
Subsampling with CLR
|
|
2
|
225
|
June 22, 2023
|
|
Aligned SILVA vs unaligned RDP
|
|
3
|
1119
|
May 3, 2023
|
|
Mock Community Recommendation
|
|
3
|
222
|
May 4, 2023
|
|
Adapter removal from Novaseq 6000
|
|
2
|
270
|
May 4, 2023
|
|
how to select minimum and maximum length of reads from summary seqs
|
|
6
|
3103
|
March 24, 2017
|
|
archaea primer set up for MiSeq
|
|
8
|
5832
|
January 5, 2023
|
|
Triming of E. coli
|
|
3
|
226
|
December 1, 2022
|
|
454 GS FLX Titanium data not converting to sff file format
|
|
2
|
262
|
September 2, 2022
|
|
Validity of using NCBI species level annotation of the reference sequences in the silva138.1 database
|
|
2
|
580
|
July 31, 2022
|
|
Classify.otu results not to a species level when database is
|
|
4
|
2410
|
July 28, 2022
|
|
Correction for multiple tests in Unifrac
|
|
2
|
239
|
July 1, 2022
|
|
Beta-diversity measurement using different datasets
|
|
4
|
304
|
June 21, 2022
|
|
Steps needed to repeat for the analysis of the subset
|
|
7
|
250
|
June 16, 2022
|
|
Alignment in V4 region
|
|
3
|
467
|
June 12, 2022
|
|
Analysis Seqs from different region
|
|
7
|
491
|
June 4, 2022
|
|
How to further classify the OTUs?
|
|
2
|
326
|
May 27, 2022
|
|
Different trainset
|
|
4
|
367
|
May 13, 2022
|
|
What Maxlength and maxhomop should i use?
|
|
3
|
341
|
May 7, 2022
|
|
Processors used by mothur software
|
|
4
|
406
|
May 6, 2022
|
|
ASV analysis and cluser.fragments
|
|
2
|
487
|
February 4, 2022
|
|
Why is performing remove.groups (to remove mock community) necessary before doing Cluster.split? (Mothur MiSeq SOP tutorial)
|
|
3
|
414
|
December 13, 2021
|
|
Test differential representation results in an independent dataset?
|
|
3
|
358
|
December 11, 2021
|
|
Bacteria_unclassified
|
|
10
|
2315
|
November 30, 2021
|