mothur

Commands in mothur


Topic Replies Activity
About the Commands in mothur category 2 April 25, 2019
How to choose start and End point for screen.seq command 1 April 4, 2020
Regrding Silva database: 27f 1492R primer region 1 April 3, 2020
Problems with summary.seqs 1 April 3, 2020
Regarding filter.seqs command option: "trump" 1 April 2, 2020
Is there a way to control the RAM usage? 1 April 2, 2020
Taxlevel argument in cluster? 2 April 2, 2020
Remove.lineage() to filter unclassified OTUs at specific taxonomic levels 2 April 2, 2020
Pcr.seqs with Silva 138 start/end 2 April 2, 2020
Silva v138 full file from Mothur Wiki 6 March 31, 2020
Mock community reference for seq.error 2 March 31, 2020
Problem with cluster (No Run) 9 March 26, 2020
Environment variable in Mothur 4 March 29, 2020
Use Galaxy Classify.Seqs Error 3 March 14, 2020
No data in the output of corr.axes command 7 March 13, 2020
How to conduct MOTHUR analysis of diatom (rbcL) sequence data ? 4 March 13, 2020
Identifying "contaminants"? 5 March 12, 2020
Running Mothur in command line mode 3 March 12, 2020
Running SOP with a single fasta file containing multiple pre-processed sequences 4 March 12, 2020
How can I tell what the categories are for merge.groups? 3 March 12, 2020
Length of filtered alignment: 0 3 March 12, 2020
Pre.cluster diff number setting based on sequence lenght 4 March 9, 2020
Generate list file from OTU table 5 March 7, 2020
Having problems in make.contig step 4 March 3, 2020
How to specify path on HPC for where to store the dist file? 6 March 1, 2020
Metastats: Missing share info for sets 3 March 1, 2020
How to work with single and paired reads 3 March 1, 2020
Mothur: format to use Picrust 8 February 28, 2020
Fasta and count file mismatch in summary.seqs 2 February 24, 2020
filter.seqs gives the error: Sequences are not all the same length, please correct. 12 February 12, 2020