mothur

Commands in mothur


About the Commands in mothur category (1)
Trim.Seqs (Output blank) (3)
Merge .fasta files for OTU counting (6)
General question about make.contigs (2)
Combining raw data with multiple Illumina MiSeq runs with overlapping barcodes (8)
Problems using make.biom for PICRUSt (8)
Pre-clustering, 40 days in the wilderness? (7)
Align.seqs() [ERROR]: template is not aligned, aborting (8)
Clustering a large dataset (7)
Fungal sequence processing SOP (4)
Filter.seqs (V3-V4 data) (5)
Filter.seqs usage (3)
Pre.cluster bug (4)
Pcr.seqs generates empty files with used primers (5)
Problems with Archaea seqs when following MiSeq SOP (3)
Demultiplexing dual indexed run? (6)
Run QIIME2 test data with Mothur (4)
Trim.seqs command issues (3)
SOP for ITS analysis using Sanger sequencing? (6)
Analysis Start and to differ groups (4)
Cluster.split or phylotype binning (5)
Heatmap.bin .SVG format not generating (3)
Mismatch detected after align (4)
Summary.seqs = 25% of the base to be ambiguous (17)
Microbial abundance/diversity (4)
Pre.cluster unoise/deblur (3)
Sub.sample/remove rare with relative abundance (3)
Missing pcr.seqs output (5)
NCBI database (11)
make.contigs with oligo creating new names (10)