mothur

Commands in mothur


Topic Replies Activity
About the Commands in mothur category 2 April 25, 2019
How do I calculate exact p-value when p<0.001 3 December 11, 2019
Make.sra with demultiplex paired end fastq files 2 December 10, 2019
Discrepancy between fasta and group counts 17 December 3, 2019
I got an error at get. groups 2 December 6, 2019
Need to separate Bacteria, Archaea and Eukarya sequences 5 December 5, 2019
Make.file error 5 December 2, 2019
Mismatch error when removing chimeras 5 November 23, 2019
Summary.seqs() after performing remove.seqs() giving me different values 8 November 16, 2019
Quality file problem 4 November 16, 2019
Make.contigs barcode question 3 November 15, 2019
Blank File Returned for Cluster.split 3 November 11, 2019
Fastq.info with oligos-file 4 November 11, 2019
Tree.shared not running on multiple processors 4 November 4, 2019
Pre.cluster hangs without error or warning 5 November 4, 2019
Remove.lineage: accnos file missing 10 November 3, 2019
Feedback on a pre.cluster issue workaround for processing ITS sequences 3 November 1, 2019
Uchime/vsearch executables do not "exist" 3 October 25, 2019
corr.axes and biplots 6 October 14, 2019
Clearcut alternative 3 October 24, 2019
Distance matrix issues - still running 7 October 14, 2019
Length of filtered alignment=0 4 October 13, 2019
Empty folder after the unique.seqs command 3 October 13, 2019
Help with make.contigs with index and oligos files 6 October 12, 2019
Convert .shared to .biom format -syntax error 3 October 11, 2019
Problem with screen.seqs (count and fasta file mismatch) 6 October 11, 2019
Trouble using pre.cluster command 3 October 10, 2019
Manage replicate samples and time point data 4 October 10, 2019
I'm running remove.rare for more than 4 days 4 September 30, 2019
Chimera detection in full length 16S 3 September 19, 2019