mothur

Commands in mothur


Topic Replies Activity
About the Commands in mothur category 2 April 25, 2019
Mismatch error when removing chimeras 4 November 13, 2019
Summary.seqs() after performing remove.seqs() giving me different values 7 November 6, 2019
Quality file problem 4 November 16, 2019
Make.contigs barcode question 3 November 15, 2019
Blank File Returned for Cluster.split 3 November 11, 2019
Fastq.info with oligos-file 4 November 11, 2019
Tree.shared not running on multiple processors 4 November 4, 2019
Pre.cluster hangs without error or warning 5 November 4, 2019
Remove.lineage: accnos file missing 10 November 3, 2019
Feedback on a pre.cluster issue workaround for processing ITS sequences 3 November 1, 2019
Uchime/vsearch executables do not "exist" 3 October 25, 2019
corr.axes and biplots 6 October 14, 2019
Clearcut alternative 3 October 24, 2019
Distance matrix issues - still running 7 October 14, 2019
Length of filtered alignment=0 4 October 13, 2019
Empty folder after the unique.seqs command 3 October 13, 2019
Help with make.contigs with index and oligos files 6 October 12, 2019
Convert .shared to .biom format -syntax error 3 October 11, 2019
Problem with screen.seqs (count and fasta file mismatch) 6 October 11, 2019
Trouble using pre.cluster command 3 October 10, 2019
Manage replicate samples and time point data 4 October 10, 2019
I'm running remove.rare for more than 4 days 4 September 30, 2019
Chimera detection in full length 16S 3 September 19, 2019
I need help working with MrDNA service sequences, providing R1 and R2 files both with barcodes? 3 September 3, 2019
Group file if already start with contigs 6 August 30, 2019
Getting an error after running unique.seqs command 5 September 9, 2019
creating .names and .groups files 4 December 4, 2014
ANOSIM and design files 6 August 29, 2019
Why am I getting this error message "HM-1_Analysis/fileList.paired.trim.contigs.good.fasta is blank, aborting"? 12 September 6, 2019